Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa3Q3UPR0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Shisa3Q3UPR0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa3Q3UPR0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa3Q3UPR0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa3Q3UPR0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa3Q3UPR0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.73□□□□□ -0.21
Shisa3Q3UPR0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa3Q3UPR0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa3Q3UPR0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa3Q3UPR0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Gm2274-201ENSMUST00000184539 609 ntBASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa3Q3UPR0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa3Q3UPR0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa3Q3UPR0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa3Q3UPR0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa3Q3UPR0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa3Q3UPR0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa3Q3UPR0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa3Q3UPR0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa3Q3UPR0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Shisa3Q3UPR0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa3Q3UPR0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Shisa3Q3UPR0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Gm36967-201ENSMUST00000193814 266 ntBASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa3Q3UPR0 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms