Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim43aQ3TL54 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Gm2274-201ENSMUST00000184539 609 ntBASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43aQ3TL54 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43aQ3TL54 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 BC037039-201ENSMUST00000192003 2205 ntBASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Gm18959-201ENSMUST00000208954 655 ntBASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43aQ3TL54 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim43aQ3TL54 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim43aQ3TL54 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.83■□□□□ 0.28
Trim43aQ3TL54 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Gm10566-201ENSMUST00000086739 996 ntBASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43aQ3TL54 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms