Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Mir7023-201ENSMUST00000185093 64 ntBASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna5Q2MKA5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Rpph1-201ENSMUST00000175096 319 ntBASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna5Q2MKA5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chrna5Q2MKA5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chrna5Q2MKA5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chrna5Q2MKA5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Chrna5Q2MKA5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna5Q2MKA5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Rprl2-201ENSMUST00000157150 290 ntBASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Gm22175-201ENSMUST00000175007 78 ntBASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna5Q2MKA5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms