Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.62□□□□□ -0.07
Col10a1Q05306 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col10a1Q05306 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Col10a1Q05306 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col10a1Q05306 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Col10a1Q05306 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Col10a1Q05306 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Col10a1Q05306 Gm25745-201ENSMUST00000174945 133 ntBASIC14.62□□□□□ -0.07
Col10a1Q05306 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Col10a1Q05306 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.62□□□□□ -0.07
Col10a1Q05306 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.62□□□□□ -0.07
Col10a1Q05306 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.62□□□□□ -0.07
Col10a1Q05306 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col10a1Q05306 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col10a1Q05306 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col10a1Q05306 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Col10a1Q05306 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.62□□□□□ -0.07
Col10a1Q05306 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col10a1Q05306 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col10a1Q05306 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Col10a1Q05306 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col10a1Q05306 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col10a1Q05306 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col10a1Q05306 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col10a1Q05306 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col10a1Q05306 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Col10a1Q05306 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Col10a1Q05306 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Col10a1Q05306 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Col10a1Q05306 Gm12644-201ENSMUST00000119935 606 ntBASIC14.61□□□□□ -0.07
Col10a1Q05306 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.61□□□□□ -0.07
Col10a1Q05306 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.61□□□□□ -0.07
Col10a1Q05306 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.61□□□□□ -0.07
Col10a1Q05306 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Col10a1Q05306 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.61□□□□□ -0.07
Col10a1Q05306 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Col10a1Q05306 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Col10a1Q05306 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.61□□□□□ -0.07
Col10a1Q05306 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Col10a1Q05306 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col10a1Q05306 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.6□□□□□ -0.07
Col10a1Q05306 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.6□□□□□ -0.07
Col10a1Q05306 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Gm25406-201ENSMUST00000157599 105 ntBASIC14.6□□□□□ -0.07
Col10a1Q05306 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.6□□□□□ -0.07
Col10a1Q05306 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.6□□□□□ -0.07
Col10a1Q05306 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col10a1Q05306 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col10a1Q05306 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col10a1Q05306 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col10a1Q05306 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col10a1Q05306 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col10a1Q05306 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms