Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.78■□□□□ 0.76
Col1a2Q01149 Gm17968-201ENSMUST00000194902 784 ntBASIC19.78■□□□□ 0.76
Col1a2Q01149 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Col1a2Q01149 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col1a2Q01149 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col1a2Q01149 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Col1a2Q01149 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col1a2Q01149 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col1a2Q01149 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col1a2Q01149 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Col1a2Q01149 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col1a2Q01149 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col1a2Q01149 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col1a2Q01149 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.77■□□□□ 0.76
Col1a2Q01149 Gm27397-201ENSMUST00000184997 107 ntBASIC19.77■□□□□ 0.76
Col1a2Q01149 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col1a2Q01149 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col1a2Q01149 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col1a2Q01149 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col1a2Q01149 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col1a2Q01149 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col1a2Q01149 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col1a2Q01149 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Col1a2Q01149 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col1a2Q01149 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Col1a2Q01149 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.76■□□□□ 0.75
Col1a2Q01149 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.76■□□□□ 0.75
Col1a2Q01149 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Gm6736-201ENSMUST00000166583 948 ntBASIC19.76■□□□□ 0.75
Col1a2Q01149 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.76■□□□□ 0.75
Col1a2Q01149 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col1a2Q01149 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.75■□□□□ 0.75
Col1a2Q01149 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Col1a2Q01149 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.75■□□□□ 0.75
Col1a2Q01149 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.75■□□□□ 0.75
Col1a2Q01149 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Col1a2Q01149 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.75■□□□□ 0.75
Col1a2Q01149 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col1a2Q01149 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.75■□□□□ 0.75
Col1a2Q01149 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Col1a2Q01149 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Col1a2Q01149 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.74■□□□□ 0.75
Col1a2Q01149 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.74■□□□□ 0.75
Col1a2Q01149 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Col1a2Q01149 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Col1a2Q01149 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Col1a2Q01149 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col1a2Q01149 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Col1a2Q01149 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.73■□□□□ 0.75
Col1a2Q01149 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.73■□□□□ 0.75
Col1a2Q01149 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col1a2Q01149 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col1a2Q01149 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.73■□□□□ 0.75
Col1a2Q01149 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col1a2Q01149 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms