Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcc1P97496 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcc1P97496 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcc1P97496 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Smarcc1P97496 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Smarcc1P97496 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
Smarcc1P97496 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Smarcc1P97496 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.77■□□□□ 0.76
Smarcc1P97496 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.77■□□□□ 0.76
Smarcc1P97496 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcc1P97496 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smarcc1P97496 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.76■□□□□ 0.75
Smarcc1P97496 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 Grk6-207ENSMUST00000225925 2769 ntBASIC19.76■□□□□ 0.75
Smarcc1P97496 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.76■□□□□ 0.75
Smarcc1P97496 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.76■□□□□ 0.75
Smarcc1P97496 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcc1P97496 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcc1P97496 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcc1P97496 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcc1P97496 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcc1P97496 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcc1P97496 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcc1P97496 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.75■□□□□ 0.75
Smarcc1P97496 Gm6257-201ENSMUST00000163864 910 ntBASIC19.75■□□□□ 0.75
Smarcc1P97496 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Smarcc1P97496 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.75■□□□□ 0.75
Smarcc1P97496 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcc1P97496 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcc1P97496 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Smarcc1P97496 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.75■□□□□ 0.75
Smarcc1P97496 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcc1P97496 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.75■□□□□ 0.75
Smarcc1P97496 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.75■□□□□ 0.75
Smarcc1P97496 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcc1P97496 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcc1P97496 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Smarcc1P97496 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.75■□□□□ 0.75
Smarcc1P97496 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcc1P97496 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcc1P97496 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Smarcc1P97496 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Smarcc1P97496 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.74■□□□□ 0.75
Smarcc1P97496 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Gm25948-201ENSMUST00000175334 112 ntBASIC19.74■□□□□ 0.75
Smarcc1P97496 Mir6990-201ENSMUST00000183724 91 ntBASIC19.74■□□□□ 0.75
Smarcc1P97496 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.74■□□□□ 0.75
Smarcc1P97496 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Smarcc1P97496 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Smarcc1P97496 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Smarcc1P97496 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcc1P97496 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smarcc1P97496 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.73■□□□□ 0.75
Smarcc1P97496 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.73■□□□□ 0.75
Smarcc1P97496 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.73■□□□□ 0.75
Smarcc1P97496 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc1P97496 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc1P97496 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms