Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.35□□□□□ -0.27
Npas1P97459 Gm9731-201ENSMUST00000209480 747 ntBASIC13.35□□□□□ -0.27
Npas1P97459 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Npas1P97459 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Npas1P97459 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Npas1P97459 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Npas1P97459 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Npas1P97459 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Gm12085-201ENSMUST00000119263 940 ntBASIC13.34□□□□□ -0.27
Npas1P97459 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.34□□□□□ -0.27
Npas1P97459 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.34□□□□□ -0.27
Npas1P97459 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Gm18666-201ENSMUST00000190039 958 ntBASIC13.34□□□□□ -0.27
Npas1P97459 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Npas1P97459 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Npas1P97459 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.34□□□□□ -0.27
Npas1P97459 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Npas1P97459 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Npas1P97459 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Npas1P97459 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Npas1P97459 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.33□□□□□ -0.28
Npas1P97459 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.33□□□□□ -0.28
Npas1P97459 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Npas1P97459 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.33□□□□□ -0.28
Npas1P97459 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Npas1P97459 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.33□□□□□ -0.28
Npas1P97459 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.33□□□□□ -0.28
Npas1P97459 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
Npas1P97459 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Npas1P97459 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Npas1P97459 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.32□□□□□ -0.28
Npas1P97459 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Npas1P97459 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.32□□□□□ -0.28
Npas1P97459 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Npas1P97459 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Npas1P97459 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Npas1P97459 Gm7638-201ENSMUST00000121348 967 ntBASIC13.32□□□□□ -0.28
Npas1P97459 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.32□□□□□ -0.28
Npas1P97459 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.32□□□□□ -0.28
Npas1P97459 Gm37856-201ENSMUST00000191634 999 ntBASIC13.32□□□□□ -0.28
Npas1P97459 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.32□□□□□ -0.28
Npas1P97459 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Npas1P97459 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms