Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Gm45612-201ENSMUST00000211320 160 ntBASIC19.87■□□□□ 0.77
Nkx2-3P97334 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-3P97334 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.87■□□□□ 0.77
Nkx2-3P97334 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.87■□□□□ 0.77
Nkx2-3P97334 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-3P97334 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-3P97334 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Gm10576-201ENSMUST00000191927 825 ntBASIC19.86■□□□□ 0.77
Nkx2-3P97334 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.86■□□□□ 0.77
Nkx2-3P97334 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-3P97334 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Nkx2-3P97334 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Nkx2-3P97334 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.84■□□□□ 0.77
Nkx2-3P97334 Gm27494-201ENSMUST00000184735 189 ntBASIC19.84■□□□□ 0.77
Nkx2-3P97334 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.84■□□□□ 0.77
Nkx2-3P97334 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-3P97334 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-3P97334 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-3P97334 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-3P97334 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-3P97334 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Nkx2-3P97334 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-3P97334 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-3P97334 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-3P97334 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-3P97334 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-3P97334 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-3P97334 Gm11745-201ENSMUST00000121669 448 ntBASIC19.83■□□□□ 0.77
Nkx2-3P97334 Gm44335-201ENSMUST00000196879 141 ntBASIC19.83■□□□□ 0.77
Nkx2-3P97334 Gm44297-201ENSMUST00000198304 141 ntBASIC19.83■□□□□ 0.77
Nkx2-3P97334 Gm44346-201ENSMUST00000198851 141 ntBASIC19.83■□□□□ 0.77
Nkx2-3P97334 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-3P97334 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-3P97334 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-3P97334 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx2-3P97334 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Nkx2-3P97334 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx2-3P97334 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx2-3P97334 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.82■□□□□ 0.76
Nkx2-3P97334 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-3P97334 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-3P97334 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-3P97334 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-3P97334 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-3P97334 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-3P97334 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Nkx2-3P97334 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms