Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.85□□□□□ -0.35
Sssca1P56873 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sssca1P56873 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sssca1P56873 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.85□□□□□ -0.35
Sssca1P56873 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.85□□□□□ -0.35
Sssca1P56873 Gm8520-201ENSMUST00000186517 868 ntBASIC12.85□□□□□ -0.35
Sssca1P56873 Gm7370-201ENSMUST00000219471 767 ntBASIC12.85□□□□□ -0.35
Sssca1P56873 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sssca1P56873 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.85□□□□□ -0.35
Sssca1P56873 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sssca1P56873 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.85□□□□□ -0.35
Sssca1P56873 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.85□□□□□ -0.35
Sssca1P56873 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sssca1P56873 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sssca1P56873 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sssca1P56873 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sssca1P56873 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sssca1P56873 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sssca1P56873 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.84□□□□□ -0.35
Sssca1P56873 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sssca1P56873 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sssca1P56873 Gm13474-201ENSMUST00000122466 815 ntBASIC12.84□□□□□ -0.35
Sssca1P56873 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.84□□□□□ -0.35
Sssca1P56873 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.84□□□□□ -0.35
Sssca1P56873 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.84□□□□□ -0.35
Sssca1P56873 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sssca1P56873 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sssca1P56873 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sssca1P56873 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sssca1P56873 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sssca1P56873 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Sssca1P56873 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Sssca1P56873 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.83□□□□□ -0.36
Sssca1P56873 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.83□□□□□ -0.36
Sssca1P56873 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Mir5122-201ENSMUST00000175004 89 ntBASIC12.83□□□□□ -0.36
Sssca1P56873 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.83□□□□□ -0.36
Sssca1P56873 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.83□□□□□ -0.36
Sssca1P56873 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sssca1P56873 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.83□□□□□ -0.36
Sssca1P56873 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Sssca1P56873 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sssca1P56873 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms