Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Atxn1P54254 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.72■□□□□ 0.11
Atxn1P54254 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Atxn1P54254 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Atxn1P54254 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Atxn1P54254 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Atxn1P54254 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atxn1P54254 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atxn1P54254 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atxn1P54254 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atxn1P54254 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atxn1P54254 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atxn1P54254 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Atxn1P54254 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atxn1P54254 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Atxn1P54254 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atxn1P54254 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Atxn1P54254 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atxn1P54254 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Atxn1P54254 Gm12497-201ENSMUST00000138778 237 ntBASIC15.71■□□□□ 0.11
Atxn1P54254 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.71■□□□□ 0.11
Atxn1P54254 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.71■□□□□ 0.11
Atxn1P54254 AA543401-201ENSMUST00000164248 1269 ntBASIC15.71■□□□□ 0.11
Atxn1P54254 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Atxn1P54254 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atxn1P54254 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Atxn1P54254 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atxn1P54254 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Atxn1P54254 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atxn1P54254 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Atxn1P54254 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Atxn1P54254 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atxn1P54254 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Atxn1P54254 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Atxn1P54254 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.7■□□□□ 0.1
Atxn1P54254 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Gm13616-201ENSMUST00000120600 222 ntBASIC15.7■□□□□ 0.1
Atxn1P54254 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.7■□□□□ 0.1
Atxn1P54254 Gm20949-201ENSMUST00000206478 952 ntBASIC15.7■□□□□ 0.1
Atxn1P54254 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.7■□□□□ 0.1
Atxn1P54254 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Atxn1P54254 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.7■□□□□ 0.1
Atxn1P54254 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Atxn1P54254 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Atxn1P54254 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Atxn1P54254 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Atxn1P54254 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atxn1P54254 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Atxn1P54254 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.69■□□□□ 0.1
Atxn1P54254 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.69■□□□□ 0.1
Atxn1P54254 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.69■□□□□ 0.1
Atxn1P54254 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Atxn1P54254 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atxn1P54254 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atxn1P54254 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atxn1P54254 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Atxn1P54254 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atxn1P54254 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Atxn1P54254 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atxn1P54254 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atxn1P54254 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atxn1P54254 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atxn1P54254 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atxn1P54254 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Atxn1P54254 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atxn1P54254 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atxn1P54254 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atxn1P54254 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms