Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sox1P53783 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Gm25287-201ENSMUST00000103846 110 ntBASIC16.17■□□□□ 0.18
Sox1P53783 Gm22918-201ENSMUST00000103855 110 ntBASIC16.17■□□□□ 0.18
Sox1P53783 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.17■□□□□ 0.18
Sox1P53783 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.17■□□□□ 0.18
Sox1P53783 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.17■□□□□ 0.18
Sox1P53783 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.17■□□□□ 0.18
Sox1P53783 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Sox1P53783 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sox1P53783 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.17■□□□□ 0.18
Sox1P53783 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.17■□□□□ 0.18
Sox1P53783 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.16■□□□□ 0.18
Sox1P53783 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.16■□□□□ 0.18
Sox1P53783 Gm18489-201ENSMUST00000172565 551 ntBASIC16.16■□□□□ 0.18
Sox1P53783 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sox1P53783 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.16■□□□□ 0.18
Sox1P53783 Gm18062-201ENSMUST00000208020 547 ntBASIC16.16■□□□□ 0.18
Sox1P53783 Gm18055-201ENSMUST00000208254 547 ntBASIC16.16■□□□□ 0.18
Sox1P53783 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.16■□□□□ 0.18
Sox1P53783 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.16■□□□□ 0.18
Sox1P53783 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.16■□□□□ 0.18
Sox1P53783 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.16■□□□□ 0.18
Sox1P53783 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Sox1P53783 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sox1P53783 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox1P53783 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sox1P53783 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox1P53783 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox1P53783 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox1P53783 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sox1P53783 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox1P53783 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Sox1P53783 Gm13453-201ENSMUST00000118708 357 ntBASIC16.15■□□□□ 0.18
Sox1P53783 Gm15358-201ENSMUST00000119249 520 ntBASIC16.15■□□□□ 0.18
Sox1P53783 Gm15693-201ENSMUST00000120470 637 ntBASIC16.15■□□□□ 0.18
Sox1P53783 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.15■□□□□ 0.18
Sox1P53783 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox1P53783 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.15■□□□□ 0.18
Sox1P53783 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox1P53783 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sox1P53783 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.15■□□□□ 0.18
Sox1P53783 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox1P53783 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox1P53783 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox1P53783 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox1P53783 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox1P53783 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Sox1P53783 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox1P53783 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.15■□□□□ 0.18
Sox1P53783 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox1P53783 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox1P53783 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sox1P53783 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 Gm6415-201ENSMUST00000118488 348 ntBASIC16.14■□□□□ 0.17
Sox1P53783 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.14■□□□□ 0.17
Sox1P53783 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.14■□□□□ 0.17
Sox1P53783 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox1P53783 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms