Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pdx1P52946 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pdx1P52946 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.68■□□□□ 0.1
Pdx1P52946 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.68■□□□□ 0.1
Pdx1P52946 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.68■□□□□ 0.1
Pdx1P52946 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 Gm7506-201ENSMUST00000207758 815 ntBASIC15.68■□□□□ 0.1
Pdx1P52946 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.68■□□□□ 0.1
Pdx1P52946 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.68■□□□□ 0.1
Pdx1P52946 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pdx1P52946 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdx1P52946 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.67■□□□□ 0.1
Pdx1P52946 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Pdx1P52946 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Pdx1P52946 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pdx1P52946 Gm12644-201ENSMUST00000119935 606 ntBASIC15.67■□□□□ 0.1
Pdx1P52946 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.67■□□□□ 0.1
Pdx1P52946 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.67■□□□□ 0.1
Pdx1P52946 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.67■□□□□ 0.1
Pdx1P52946 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Pdx1P52946 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pdx1P52946 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdx1P52946 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Pdx1P52946 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Pdx1P52946 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Pdx1P52946 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pdx1P52946 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pdx1P52946 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.66■□□□□ 0.1
Pdx1P52946 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.66■□□□□ 0.1
Pdx1P52946 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.66■□□□□ 0.1
Pdx1P52946 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Pdx1P52946 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Pdx1P52946 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.66■□□□□ 0.1
Pdx1P52946 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.66■□□□□ 0.1
Pdx1P52946 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdx1P52946 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.66■□□□□ 0.1
Pdx1P52946 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.65■□□□□ 0.1
Pdx1P52946 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.65■□□□□ 0.1
Pdx1P52946 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.65■□□□□ 0.1
Pdx1P52946 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.65■□□□□ 0.1
Pdx1P52946 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pdx1P52946 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pdx1P52946 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pdx1P52946 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms