Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox18P43680 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.15■□□□□ 0.02
Sox18P43680 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC15.15■□□□□ 0.02
Sox18P43680 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Sox18P43680 Gm45167-201ENSMUST00000208007 322 ntBASIC15.15■□□□□ 0.02
Sox18P43680 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 AC132260.2-201ENSMUST00000224482 344 ntBASIC15.15■□□□□ 0.02
Sox18P43680 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Sox18P43680 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox18P43680 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.14■□□□□ 0.01
Sox18P43680 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sox18P43680 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.14■□□□□ 0.01
Sox18P43680 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.14■□□□□ 0.01
Sox18P43680 Gm23547-201ENSMUST00000158210 271 ntBASIC15.14■□□□□ 0.01
Sox18P43680 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.14■□□□□ 0.01
Sox18P43680 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.14■□□□□ 0.01
Sox18P43680 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.14■□□□□ 0.01
Sox18P43680 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.14■□□□□ 0.01
Sox18P43680 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.14■□□□□ 0.01
Sox18P43680 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox18P43680 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sox18P43680 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.13■□□□□ 0.01
Sox18P43680 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.13■□□□□ 0.01
Sox18P43680 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.13■□□□□ 0.01
Sox18P43680 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.13■□□□□ 0.01
Sox18P43680 Gm37153-201ENSMUST00000193637 231 ntBASIC15.13■□□□□ 0.01
Sox18P43680 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.13■□□□□ 0.01
Sox18P43680 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sox18P43680 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.13■□□□□ 0.01
Sox18P43680 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox18P43680 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Sox18P43680 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Sox18P43680 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.13■□□□□ 0.01
Sox18P43680 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Sox18P43680 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.12■□□□□ 0.01
Sox18P43680 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.12■□□□□ 0.01
Sox18P43680 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.12■□□□□ 0.01
Sox18P43680 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Gm4899-201ENSMUST00000178708 719 ntBASIC15.12■□□□□ 0.01
Sox18P43680 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox18P43680 Gm44335-201ENSMUST00000196879 141 ntBASIC15.12■□□□□ 0.01
Sox18P43680 Gm44297-201ENSMUST00000198304 141 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms