Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc2P43407 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc2P43407 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Sdc2P43407 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.81■□□□□ 0.44
Sdc2P43407 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.81■□□□□ 0.44
Sdc2P43407 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Sdc2P43407 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sdc2P43407 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.81■□□□□ 0.44
Sdc2P43407 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Sdc2P43407 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Sdc2P43407 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.81■□□□□ 0.44
Sdc2P43407 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc2P43407 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc2P43407 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sdc2P43407 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc2P43407 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.8■□□□□ 0.44
Sdc2P43407 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc2P43407 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc2P43407 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc2P43407 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc2P43407 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
Sdc2P43407 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc2P43407 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.8■□□□□ 0.44
Sdc2P43407 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc2P43407 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc2P43407 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sdc2P43407 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Sdc2P43407 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.8■□□□□ 0.44
Sdc2P43407 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc2P43407 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Sdc2P43407 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sdc2P43407 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.79■□□□□ 0.44
Sdc2P43407 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sdc2P43407 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.79■□□□□ 0.44
Sdc2P43407 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.79■□□□□ 0.44
Sdc2P43407 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Gm10013-201ENSMUST00000106074 672 ntBASIC17.79■□□□□ 0.44
Sdc2P43407 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.79■□□□□ 0.44
Sdc2P43407 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sdc2P43407 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sdc2P43407 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sdc2P43407 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc2P43407 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sdc2P43407 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc2P43407 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc2P43407 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc2P43407 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc2P43407 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc2P43407 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sdc2P43407 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.78■□□□□ 0.44
Sdc2P43407 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc2P43407 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sdc2P43407 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sdc2P43407 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.78■□□□□ 0.44
Sdc2P43407 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.78■□□□□ 0.44
Sdc2P43407 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.78■□□□□ 0.44
Sdc2P43407 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc2P43407 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc2P43407 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc2P43407 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc2P43407 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Sdc2P43407 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sdc2P43407 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms