Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmx3P42581 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmx3P42581 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.28□□□□□ -0.28
Hmx3P42581 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Hmx3P42581 Gm17661-201ENSMUST00000170317 270 ntBASIC13.28□□□□□ -0.28
Hmx3P42581 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.28□□□□□ -0.28
Hmx3P42581 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.28□□□□□ -0.28
Hmx3P42581 Gm22240-201ENSMUST00000175225 82 ntBASIC13.28□□□□□ -0.28
Hmx3P42581 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmx3P42581 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmx3P42581 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hmx3P42581 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmx3P42581 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmx3P42581 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.28□□□□□ -0.28
Hmx3P42581 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmx3P42581 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmx3P42581 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hmx3P42581 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmx3P42581 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmx3P42581 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.28□□□□□ -0.28
Hmx3P42581 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hmx3P42581 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Hmx3P42581 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmx3P42581 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Hmx3P42581 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hmx3P42581 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmx3P42581 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.27□□□□□ -0.28
Hmx3P42581 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.27□□□□□ -0.28
Hmx3P42581 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Hmx3P42581 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Hmx3P42581 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.27□□□□□ -0.28
Hmx3P42581 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hmx3P42581 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.27□□□□□ -0.29
Hmx3P42581 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.27□□□□□ -0.29
Hmx3P42581 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Hmx3P42581 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.27□□□□□ -0.29
Hmx3P42581 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Gm38027-201ENSMUST00000192315 235 ntBASIC13.27□□□□□ -0.29
Hmx3P42581 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.27□□□□□ -0.29
Hmx3P42581 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Gm10812-201ENSMUST00000099864 546 ntBASIC13.27□□□□□ -0.29
Hmx3P42581 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Hmx3P42581 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Hmx3P42581 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hmx3P42581 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.26□□□□□ -0.29
Hmx3P42581 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hmx3P42581 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.26□□□□□ -0.29
Hmx3P42581 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.26□□□□□ -0.29
Hmx3P42581 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.26□□□□□ -0.29
Hmx3P42581 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Gm7638-201ENSMUST00000121348 967 ntBASIC13.26□□□□□ -0.29
Hmx3P42581 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hmx3P42581 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.26□□□□□ -0.29
Hmx3P42581 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Hmx3P42581 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.26□□□□□ -0.29
Hmx3P42581 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hmx3P42581 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hmx3P42581 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hmx3P42581 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmx3P42581 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.25□□□□□ -0.29
Hmx3P42581 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hmx3P42581 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Hmx3P42581 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms