Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.66□□□□□ -0.06
Foxa1P35582 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.66□□□□□ -0.06
Foxa1P35582 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Foxa1P35582 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.66□□□□□ -0.06
Foxa1P35582 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Foxa1P35582 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.66□□□□□ -0.06
Foxa1P35582 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.66□□□□□ -0.06
Foxa1P35582 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.66□□□□□ -0.06
Foxa1P35582 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Foxa1P35582 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.65□□□□□ -0.06
Foxa1P35582 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Foxa1P35582 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Foxa1P35582 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Foxa1P35582 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.65□□□□□ -0.06
Foxa1P35582 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.65□□□□□ -0.06
Foxa1P35582 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.65□□□□□ -0.06
Foxa1P35582 Gm7506-201ENSMUST00000207758 815 ntBASIC14.65□□□□□ -0.06
Foxa1P35582 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.65□□□□□ -0.06
Foxa1P35582 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.65□□□□□ -0.06
Foxa1P35582 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Foxa1P35582 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Foxa1P35582 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Foxa1P35582 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Foxa1P35582 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Foxa1P35582 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
Foxa1P35582 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.64□□□□□ -0.07
Foxa1P35582 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.64□□□□□ -0.07
Foxa1P35582 Gm6257-201ENSMUST00000163864 910 ntBASIC14.64□□□□□ -0.07
Foxa1P35582 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.64□□□□□ -0.07
Foxa1P35582 Gm9172-201ENSMUST00000212092 954 ntBASIC14.64□□□□□ -0.07
Foxa1P35582 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Foxa1P35582 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Foxa1P35582 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Foxa1P35582 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Foxa1P35582 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms