Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Vcam1P29533 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.17■□□□□ 0.5
Vcam1P29533 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.17■□□□□ 0.5
Vcam1P29533 Gm44492-201ENSMUST00000197012 141 ntBASIC18.17■□□□□ 0.5
Vcam1P29533 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vcam1P29533 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.17■□□□□ 0.5
Vcam1P29533 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.17■□□□□ 0.5
Vcam1P29533 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vcam1P29533 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.17■□□□□ 0.5
Vcam1P29533 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Vcam1P29533 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.16■□□□□ 0.5
Vcam1P29533 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Vcam1P29533 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.16■□□□□ 0.5
Vcam1P29533 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.16■□□□□ 0.5
Vcam1P29533 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.16■□□□□ 0.5
Vcam1P29533 Chchd1-203ENSMUST00000224633 557 ntBASIC18.16■□□□□ 0.5
Vcam1P29533 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.16■□□□□ 0.5
Vcam1P29533 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vcam1P29533 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vcam1P29533 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.14■□□□□ 0.5
Vcam1P29533 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vcam1P29533 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Vcam1P29533 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vcam1P29533 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcam1P29533 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Vcam1P29533 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcam1P29533 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vcam1P29533 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcam1P29533 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vcam1P29533 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcam1P29533 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.14■□□□□ 0.49
Vcam1P29533 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vcam1P29533 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.14■□□□□ 0.49
Vcam1P29533 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.14■□□□□ 0.49
Vcam1P29533 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcam1P29533 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcam1P29533 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vcam1P29533 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vcam1P29533 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.14■□□□□ 0.49
Vcam1P29533 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcam1P29533 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcam1P29533 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vcam1P29533 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Vcam1P29533 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Vcam1P29533 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcam1P29533 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.13■□□□□ 0.49
Vcam1P29533 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vcam1P29533 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.13■□□□□ 0.49
Vcam1P29533 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vcam1P29533 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vcam1P29533 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vcam1P29533 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vcam1P29533 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.13■□□□□ 0.49
Vcam1P29533 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Vcam1P29533 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vcam1P29533 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms