Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pde6aP27664 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pde6aP27664 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pde6aP27664 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.37■□□□□ 0.53
Pde6aP27664 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.37■□□□□ 0.53
Pde6aP27664 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Pde6aP27664 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.37■□□□□ 0.53
Pde6aP27664 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pde6aP27664 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pde6aP27664 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pde6aP27664 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.36■□□□□ 0.53
Pde6aP27664 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pde6aP27664 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.36■□□□□ 0.53
Pde6aP27664 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.36■□□□□ 0.53
Pde6aP27664 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.36■□□□□ 0.53
Pde6aP27664 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.36■□□□□ 0.53
Pde6aP27664 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.36■□□□□ 0.53
Pde6aP27664 Gm6296-201ENSMUST00000222599 943 ntBASIC18.36■□□□□ 0.53
Pde6aP27664 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.36■□□□□ 0.53
Pde6aP27664 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.36■□□□□ 0.53
Pde6aP27664 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pde6aP27664 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pde6aP27664 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Pde6aP27664 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.35■□□□□ 0.53
Pde6aP27664 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.35■□□□□ 0.53
Pde6aP27664 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pde6aP27664 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 App-207ENSMUST00000227737 2827 ntBASIC18.35■□□□□ 0.53
Pde6aP27664 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.35■□□□□ 0.53
Pde6aP27664 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pde6aP27664 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6aP27664 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6aP27664 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6aP27664 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6aP27664 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6aP27664 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6aP27664 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6aP27664 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.34■□□□□ 0.53
Pde6aP27664 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6aP27664 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6aP27664 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6aP27664 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pde6aP27664 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pde6aP27664 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pde6aP27664 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pde6aP27664 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pde6aP27664 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.33■□□□□ 0.53
Pde6aP27664 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pde6aP27664 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pde6aP27664 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pde6aP27664 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.33■□□□□ 0.52
Pde6aP27664 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pde6aP27664 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.33■□□□□ 0.52
Pde6aP27664 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.33■□□□□ 0.52
Pde6aP27664 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.33■□□□□ 0.52
Pde6aP27664 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.33■□□□□ 0.52
Pde6aP27664 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6aP27664 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6aP27664 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6aP27664 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pde6aP27664 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms