Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntn1P12960 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cntn1P12960 Mir5131-201ENSMUST00000175426 93 ntBASIC15.19■□□□□ 0.02
Cntn1P12960 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cntn1P12960 Gm2651-201ENSMUST00000203560 838 ntBASIC15.19■□□□□ 0.02
Cntn1P12960 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.19■□□□□ 0.02
Cntn1P12960 Gm10060-201ENSMUST00000212002 111 ntBASIC15.19■□□□□ 0.02
Cntn1P12960 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntn1P12960 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cntn1P12960 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cntn1P12960 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntn1P12960 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Cntn1P12960 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.19■□□□□ 0.02
Cntn1P12960 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntn1P12960 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntn1P12960 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntn1P12960 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntn1P12960 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Cntn1P12960 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntn1P12960 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntn1P12960 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntn1P12960 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cntn1P12960 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntn1P12960 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Cntn1P12960 Gm25990-201ENSMUST00000102440 86 ntBASIC15.18■□□□□ 0.02
Cntn1P12960 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntn1P12960 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.18■□□□□ 0.02
Cntn1P12960 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cntn1P12960 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntn1P12960 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntn1P12960 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntn1P12960 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cntn1P12960 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cntn1P12960 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.17■□□□□ 0.02
Cntn1P12960 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.17■□□□□ 0.02
Cntn1P12960 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.17■□□□□ 0.02
Cntn1P12960 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.17■□□□□ 0.02
Cntn1P12960 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.17■□□□□ 0.02
Cntn1P12960 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.17■□□□□ 0.02
Cntn1P12960 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cntn1P12960 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cntn1P12960 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cntn1P12960 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cntn1P12960 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Cntn1P12960 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cntn1P12960 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cntn1P12960 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cntn1P12960 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cntn1P12960 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cntn1P12960 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cntn1P12960 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cntn1P12960 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cntn1P12960 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cntn1P12960 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cntn1P12960 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.16■□□□□ 0.02
Cntn1P12960 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cntn1P12960 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Cntn1P12960 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Gm8825-201ENSMUST00000182565 998 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Gm4518-201ENSMUST00000182638 718 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cntn1P12960 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cntn1P12960 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.16■□□□□ 0.02
Cntn1P12960 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.16■□□□□ 0.02
Cntn1P12960 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cntn1P12960 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms