Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cxcl1P12850 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cxcl1P12850 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.15□□□□□ -0.3
Cxcl1P12850 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.15□□□□□ -0.3
Cxcl1P12850 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.15□□□□□ -0.3
Cxcl1P12850 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cxcl1P12850 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cxcl1P12850 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cxcl1P12850 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cxcl1P12850 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.15□□□□□ -0.3
Cxcl1P12850 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cxcl1P12850 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cxcl1P12850 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cxcl1P12850 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cxcl1P12850 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.14□□□□□ -0.31
Cxcl1P12850 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Gm26039-201ENSMUST00000158152 144 ntBASIC13.14□□□□□ -0.31
Cxcl1P12850 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.14□□□□□ -0.31
Cxcl1P12850 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cxcl1P12850 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.14□□□□□ -0.31
Cxcl1P12850 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cxcl1P12850 BC037039-201ENSMUST00000192003 2205 ntBASIC13.14□□□□□ -0.31
Cxcl1P12850 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cxcl1P12850 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.14□□□□□ -0.31
Cxcl1P12850 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cxcl1P12850 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Cxcl1P12850 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.13□□□□□ -0.31
Cxcl1P12850 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Cxcl1P12850 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.13□□□□□ -0.31
Cxcl1P12850 Mir1668-201ENSMUST00000184114 107 ntBASIC13.13□□□□□ -0.31
Cxcl1P12850 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.13□□□□□ -0.31
Cxcl1P12850 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.13□□□□□ -0.31
Cxcl1P12850 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Cxcl1P12850 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cxcl1P12850 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.13□□□□□ -0.31
Cxcl1P12850 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.13□□□□□ -0.31
Cxcl1P12850 Gm5417-201ENSMUST00000079706 384 ntBASIC13.13□□□□□ -0.31
Cxcl1P12850 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cxcl1P12850 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cxcl1P12850 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cxcl1P12850 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl1P12850 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl1P12850 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl1P12850 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cxcl1P12850 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms