Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.34□□□□□ -0.11
Ctla2aP12399 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.34□□□□□ -0.11
Ctla2aP12399 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ctla2aP12399 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.34□□□□□ -0.11
Ctla2aP12399 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctla2aP12399 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ctla2aP12399 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ctla2aP12399 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ctla2aP12399 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ctla2aP12399 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ctla2aP12399 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Ctla2aP12399 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ctla2aP12399 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ctla2aP12399 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctla2aP12399 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctla2aP12399 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ctla2aP12399 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ctla2aP12399 Actl10-202ENSMUST00000226583 1501 ntBASIC14.33□□□□□ -0.12
Ctla2aP12399 Gm12933-201ENSMUST00000120203 872 ntBASIC14.33□□□□□ -0.12
Ctla2aP12399 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.33□□□□□ -0.12
Ctla2aP12399 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.33□□□□□ -0.12
Ctla2aP12399 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.33□□□□□ -0.12
Ctla2aP12399 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.33□□□□□ -0.12
Ctla2aP12399 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctla2aP12399 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctla2aP12399 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctla2aP12399 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctla2aP12399 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctla2aP12399 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctla2aP12399 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctla2aP12399 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ctla2aP12399 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctla2aP12399 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctla2aP12399 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctla2aP12399 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctla2aP12399 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ctla2aP12399 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ctla2aP12399 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ctla2aP12399 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.32□□□□□ -0.12
Ctla2aP12399 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ctla2aP12399 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Ctla2aP12399 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ctla2aP12399 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctla2aP12399 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ctla2aP12399 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ctla2aP12399 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctla2aP12399 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ctla2aP12399 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctla2aP12399 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctla2aP12399 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctla2aP12399 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctla2aP12399 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Ctla2aP12399 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ctla2aP12399 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctla2aP12399 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.31□□□□□ -0.12
Ctla2aP12399 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.31□□□□□ -0.12
Ctla2aP12399 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctla2aP12399 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Ctla2aP12399 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms