Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
P06323 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
P06323 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.87□□□□□ -0.35
P06323 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.87□□□□□ -0.35
P06323 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Gm7889-201ENSMUST00000185591 958 ntBASIC12.87□□□□□ -0.35
P06323 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.87□□□□□ -0.35
P06323 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
P06323 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.87□□□□□ -0.35
P06323 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.87□□□□□ -0.35
P06323 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
P06323 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.87□□□□□ -0.35
P06323 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P06323 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.86□□□□□ -0.35
P06323 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
P06323 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Gm27389-201ENSMUST00000183622 195 ntBASIC12.86□□□□□ -0.35
P06323 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.86□□□□□ -0.35
P06323 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.86□□□□□ -0.35
P06323 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.86□□□□□ -0.35
P06323 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.86□□□□□ -0.35
P06323 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
P06323 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.86□□□□□ -0.35
P06323 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
P06323 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06323 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
P06323 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.85□□□□□ -0.35
P06323 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
P06323 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.85□□□□□ -0.35
P06323 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.85□□□□□ -0.35
P06323 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.85□□□□□ -0.35
P06323 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.85□□□□□ -0.35
P06323 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
P06323 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
P06323 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06323 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.85□□□□□ -0.35
P06323 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
P06323 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06323 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P06323 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06323 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
P06323 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06323 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms