Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hoxa3P02831 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hoxa3P02831 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Hoxa3P02831 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.29□□□□□ -0.28
Hoxa3P02831 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hoxa3P02831 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Hoxa3P02831 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hoxa3P02831 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hoxa3P02831 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.28□□□□□ -0.28
Hoxa3P02831 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Hoxa3P02831 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Hoxa3P02831 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hoxa3P02831 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Gm25745-201ENSMUST00000174945 133 ntBASIC13.28□□□□□ -0.28
Hoxa3P02831 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.28□□□□□ -0.28
Hoxa3P02831 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.28□□□□□ -0.28
Hoxa3P02831 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.28□□□□□ -0.28
Hoxa3P02831 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.28□□□□□ -0.28
Hoxa3P02831 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Rps4l-201ENSMUST00000071745 943 ntBASIC13.28□□□□□ -0.28
Hoxa3P02831 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Hoxa3P02831 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.28□□□□□ -0.28
Hoxa3P02831 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Hoxa3P02831 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxa3P02831 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxa3P02831 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxa3P02831 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxa3P02831 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxa3P02831 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxa3P02831 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxa3P02831 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Hoxa3P02831 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Hoxa3P02831 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.27□□□□□ -0.29
Hoxa3P02831 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Hoxa3P02831 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Hoxa3P02831 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxa3P02831 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Hoxa3P02831 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxa3P02831 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hoxa3P02831 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxa3P02831 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxa3P02831 Gm7862-201ENSMUST00000121461 292 ntBASIC13.26□□□□□ -0.29
Hoxa3P02831 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.26□□□□□ -0.29
Hoxa3P02831 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxa3P02831 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.26□□□□□ -0.29
Hoxa3P02831 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms