Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.23□□□□□ -0.61
Hbb-b1P02088 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.23□□□□□ -0.61
Hbb-b1P02088 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hbb-b1P02088 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.22□□□□□ -0.61
Hbb-b1P02088 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.22□□□□□ -0.61
Hbb-b1P02088 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Gm26833-201ENSMUST00000180899 440 ntBASIC11.22□□□□□ -0.61
Hbb-b1P02088 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.22□□□□□ -0.61
Hbb-b1P02088 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hbb-b1P02088 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hbb-b1P02088 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC11.21□□□□□ -0.61
Hbb-b1P02088 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC11.21□□□□□ -0.61
Hbb-b1P02088 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Gm6576-201ENSMUST00000169678 883 ntBASIC11.21□□□□□ -0.61
Hbb-b1P02088 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC11.21□□□□□ -0.61
Hbb-b1P02088 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hbb-b1P02088 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Gm9988-201ENSMUST00000069786 435 ntBASIC11.21□□□□□ -0.61
Hbb-b1P02088 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hbb-b1P02088 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Hbb-b1P02088 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Hbb-b1P02088 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hbb-b1P02088 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.21□□□□□ -0.62
Hbb-b1P02088 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Hbb-b1P02088 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hbb-b1P02088 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hbb-b1P02088 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hbb-b1P02088 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hbb-b1P02088 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.21□□□□□ -0.62
Hbb-b1P02088 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Hbb-b1P02088 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Hbb-b1P02088 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Hbb-b1P02088 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Reep4-203ENSMUST00000226563 1444 ntBASIC11.2□□□□□ -0.62
Hbb-b1P02088 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hbb-b1P02088 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms