Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Vti1aO89116 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vti1aO89116 Gm25990-201ENSMUST00000102440 86 ntBASIC17.07■□□□□ 0.32
Vti1aO89116 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vti1aO89116 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vti1aO89116 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vti1aO89116 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vti1aO89116 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vti1aO89116 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vti1aO89116 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vti1aO89116 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vti1aO89116 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vti1aO89116 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Vti1aO89116 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vti1aO89116 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vti1aO89116 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vti1aO89116 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vti1aO89116 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vti1aO89116 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.06■□□□□ 0.32
Vti1aO89116 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.06■□□□□ 0.32
Vti1aO89116 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.06■□□□□ 0.32
Vti1aO89116 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.06■□□□□ 0.32
Vti1aO89116 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.06■□□□□ 0.32
Vti1aO89116 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vti1aO89116 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vti1aO89116 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vti1aO89116 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Vti1aO89116 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vti1aO89116 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vti1aO89116 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Vti1aO89116 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vti1aO89116 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Vti1aO89116 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vti1aO89116 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vti1aO89116 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.05■□□□□ 0.32
Vti1aO89116 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.05■□□□□ 0.32
Vti1aO89116 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.05■□□□□ 0.32
Vti1aO89116 Gm7230-201ENSMUST00000173026 815 ntBASIC17.05■□□□□ 0.32
Vti1aO89116 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Vti1aO89116 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.05■□□□□ 0.32
Vti1aO89116 Gm5264-201ENSMUST00000190584 848 ntBASIC17.05■□□□□ 0.32
Vti1aO89116 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Vti1aO89116 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Vti1aO89116 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vti1aO89116 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Vti1aO89116 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.04■□□□□ 0.32
Vti1aO89116 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.04■□□□□ 0.32
Vti1aO89116 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.04■□□□□ 0.32
Vti1aO89116 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Vti1aO89116 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vti1aO89116 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Vti1aO89116 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1aO89116 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1aO89116 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vti1aO89116 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vti1aO89116 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1aO89116 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1aO89116 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1aO89116 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1aO89116 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vti1aO89116 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Vti1aO89116 Gm4459-201ENSMUST00000118750 468 ntBASIC17.03■□□□□ 0.32
Vti1aO89116 Gm12260-201ENSMUST00000122447 411 ntBASIC17.03■□□□□ 0.32
Vti1aO89116 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.03■□□□□ 0.32
Vti1aO89116 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
Vti1aO89116 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1aO89116 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.03■□□□□ 0.32
Vti1aO89116 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vti1aO89116 Gm8655-201ENSMUST00000221159 852 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms