Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm27430-201ENSMUST00000184585 107 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm44333-201ENSMUST00000197168 107 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm43125-201ENSMUST00000201724 730 ntBASIC16.28■□□□□ 0.2
Syn1O88935 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Syn1O88935 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Syn1O88935 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Syn1O88935 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.27■□□□□ 0.2
Syn1O88935 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Syn1O88935 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syn1O88935 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syn1O88935 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.27■□□□□ 0.2
Syn1O88935 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syn1O88935 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Syn1O88935 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syn1O88935 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.27■□□□□ 0.2
Syn1O88935 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.27■□□□□ 0.2
Syn1O88935 Gm18889-201ENSMUST00000174284 929 ntBASIC16.27■□□□□ 0.2
Syn1O88935 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Syn1O88935 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.27■□□□□ 0.2
Syn1O88935 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.27■□□□□ 0.2
Syn1O88935 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.27■□□□□ 0.2
Syn1O88935 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syn1O88935 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Syn1O88935 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syn1O88935 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.27■□□□□ 0.2
Syn1O88935 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syn1O88935 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syn1O88935 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Syn1O88935 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Syn1O88935 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Syn1O88935 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Syn1O88935 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Syn1O88935 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Syn1O88935 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Syn1O88935 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Syn1O88935 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.26■□□□□ 0.19
Syn1O88935 Rprl2-201ENSMUST00000157150 290 ntBASIC16.26■□□□□ 0.19
Syn1O88935 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Syn1O88935 Gm7774-201ENSMUST00000200064 533 ntBASIC16.26■□□□□ 0.19
Syn1O88935 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.26■□□□□ 0.19
Syn1O88935 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.26■□□□□ 0.19
Syn1O88935 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Syn1O88935 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Syn1O88935 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Syn1O88935 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Syn1O88935 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Syn1O88935 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.25■□□□□ 0.19
Syn1O88935 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.25■□□□□ 0.19
Syn1O88935 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.25■□□□□ 0.19
Syn1O88935 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.25■□□□□ 0.19
Syn1O88935 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.25■□□□□ 0.19
Syn1O88935 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Syn1O88935 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Syn1O88935 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Syn1O88935 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syn1O88935 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syn1O88935 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.24■□□□□ 0.19
Syn1O88935 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syn1O88935 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms