Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a20bO88575 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Slc6a20bO88575 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a20bO88575 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a20bO88575 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a20bO88575 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a20bO88575 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Slc6a20bO88575 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.23■□□□□ 0.35
Slc6a20bO88575 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Slc6a20bO88575 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.23■□□□□ 0.35
Slc6a20bO88575 Rpph1-201ENSMUST00000175096 319 ntBASIC17.23■□□□□ 0.35
Slc6a20bO88575 Mir6977-201ENSMUST00000184960 64 ntBASIC17.23■□□□□ 0.35
Slc6a20bO88575 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.23■□□□□ 0.35
Slc6a20bO88575 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.23■□□□□ 0.35
Slc6a20bO88575 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a20bO88575 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Grk6-207ENSMUST00000225925 2769 ntBASIC17.22■□□□□ 0.35
Slc6a20bO88575 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Gm11424-201ENSMUST00000121929 829 ntBASIC17.22■□□□□ 0.35
Slc6a20bO88575 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.22■□□□□ 0.35
Slc6a20bO88575 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a20bO88575 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.21■□□□□ 0.35
Slc6a20bO88575 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Gm7774-201ENSMUST00000200064 533 ntBASIC17.21■□□□□ 0.35
Slc6a20bO88575 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.21■□□□□ 0.35
Slc6a20bO88575 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.21■□□□□ 0.35
Slc6a20bO88575 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.21■□□□□ 0.35
Slc6a20bO88575 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a20bO88575 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc6a20bO88575 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Slc6a20bO88575 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Slc6a20bO88575 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Slc6a20bO88575 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a20bO88575 Gm9385-201ENSMUST00000117563 472 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms