Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cacna1hO88427 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.36■□□□□ 0.05
Cacna1hO88427 Gm14767-201ENSMUST00000121559 586 ntBASIC15.36■□□□□ 0.05
Cacna1hO88427 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Gm6218-201ENSMUST00000219812 628 ntBASIC15.36■□□□□ 0.05
Cacna1hO88427 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Cacna1hO88427 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.36■□□□□ 0.05
Cacna1hO88427 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cacna1hO88427 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cacna1hO88427 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.36■□□□□ 0.05
Cacna1hO88427 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.36■□□□□ 0.05
Cacna1hO88427 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.36■□□□□ 0.05
Cacna1hO88427 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Gm15824-201ENSMUST00000119516 955 ntBASIC15.36■□□□□ 0.05
Cacna1hO88427 Gm9824-201ENSMUST00000178707 561 ntBASIC15.36■□□□□ 0.05
Cacna1hO88427 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cacna1hO88427 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cacna1hO88427 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cacna1hO88427 Gm12138-201ENSMUST00000122180 951 ntBASIC15.35■□□□□ 0.05
Cacna1hO88427 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.35■□□□□ 0.05
Cacna1hO88427 Gm23984-201ENSMUST00000157139 203 ntBASIC15.35■□□□□ 0.05
Cacna1hO88427 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.35■□□□□ 0.05
Cacna1hO88427 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cacna1hO88427 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cacna1hO88427 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cacna1hO88427 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cacna1hO88427 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cacna1hO88427 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cacna1hO88427 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cacna1hO88427 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cacna1hO88427 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cacna1hO88427 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cacna1hO88427 Gm24694-201ENSMUST00000180054 110 ntBASIC15.35■□□□□ 0.05
Cacna1hO88427 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cacna1hO88427 Gm27663-201ENSMUST00000184839 110 ntBASIC15.35■□□□□ 0.05
Cacna1hO88427 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.35■□□□□ 0.05
Cacna1hO88427 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.35■□□□□ 0.05
Cacna1hO88427 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cacna1hO88427 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.35■□□□□ 0.05
Cacna1hO88427 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cacna1hO88427 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cacna1hO88427 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.35■□□□□ 0.05
Cacna1hO88427 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cacna1hO88427 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.34■□□□□ 0.05
Cacna1hO88427 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.34■□□□□ 0.05
Cacna1hO88427 Gm28630-201ENSMUST00000187806 498 ntBASIC15.34■□□□□ 0.05
Cacna1hO88427 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cacna1hO88427 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.34■□□□□ 0.05
Cacna1hO88427 Gm45331-201ENSMUST00000209868 554 ntBASIC15.34■□□□□ 0.05
Cacna1hO88427 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.34■□□□□ 0.05
Cacna1hO88427 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cacna1hO88427 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cacna1hO88427 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cacna1hO88427 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cacna1hO88427 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cacna1hO88427 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.33■□□□□ 0.04
Cacna1hO88427 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cacna1hO88427 Mir3547-201ENSMUST00000175461 88 ntBASIC15.33■□□□□ 0.04
Cacna1hO88427 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.33■□□□□ 0.04
Cacna1hO88427 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cacna1hO88427 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms