Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pja1O55176 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.76■□□□□ 0.27
Pja1O55176 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.76■□□□□ 0.27
Pja1O55176 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Pja1O55176 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pja1O55176 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pja1O55176 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pja1O55176 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pja1O55176 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.75■□□□□ 0.27
Pja1O55176 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Pja1O55176 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pja1O55176 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pja1O55176 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pja1O55176 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pja1O55176 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pja1O55176 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pja1O55176 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pja1O55176 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pja1O55176 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pja1O55176 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pja1O55176 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pja1O55176 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Pja1O55176 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pja1O55176 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pja1O55176 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.75■□□□□ 0.27
Pja1O55176 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pja1O55176 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pja1O55176 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pja1O55176 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.74■□□□□ 0.27
Pja1O55176 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pja1O55176 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.74■□□□□ 0.27
Pja1O55176 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pja1O55176 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pja1O55176 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Pja1O55176 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.74■□□□□ 0.27
Pja1O55176 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pja1O55176 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pja1O55176 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pja1O55176 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pja1O55176 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pja1O55176 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Pja1O55176 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pja1O55176 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pja1O55176 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Pja1O55176 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pja1O55176 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pja1O55176 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.73■□□□□ 0.27
Pja1O55176 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.73■□□□□ 0.27
Pja1O55176 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pja1O55176 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pja1O55176 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.73■□□□□ 0.27
Pja1O55176 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.73■□□□□ 0.27
Pja1O55176 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pja1O55176 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pja1O55176 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pja1O55176 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pja1O55176 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.72■□□□□ 0.27
Pja1O55176 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pja1O55176 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pja1O55176 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pja1O55176 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pja1O55176 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pja1O55176 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pja1O55176 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pja1O55176 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pja1O55176 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pja1O55176 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pja1O55176 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pja1O55176 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Pja1O55176 Gm11355-201ENSMUST00000121120 306 ntBASIC16.72■□□□□ 0.27
Pja1O55176 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.72■□□□□ 0.27
Pja1O55176 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.72■□□□□ 0.27
Pja1O55176 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.72■□□□□ 0.27
Pja1O55176 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pja1O55176 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.72■□□□□ 0.27
Pja1O55176 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.72■□□□□ 0.27
Pja1O55176 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pja1O55176 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.72■□□□□ 0.27
Pja1O55176 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms