Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.35□□□□□ -0.27
Ccr6O54689 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccr6O54689 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccr6O54689 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr6O54689 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr6O54689 Gm12134-201ENSMUST00000122109 520 ntBASIC13.35□□□□□ -0.27
Ccr6O54689 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.35□□□□□ -0.27
Ccr6O54689 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccr6O54689 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr6O54689 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr6O54689 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr6O54689 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr6O54689 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.35□□□□□ -0.27
Ccr6O54689 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr6O54689 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr6O54689 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccr6O54689 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr6O54689 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr6O54689 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ccr6O54689 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ccr6O54689 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccr6O54689 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Ccr6O54689 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.34□□□□□ -0.27
Ccr6O54689 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Sybu-209ENSMUST00000228639 4113 ntBASIC13.34□□□□□ -0.27
Ccr6O54689 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Gm38027-201ENSMUST00000192315 235 ntBASIC13.34□□□□□ -0.27
Ccr6O54689 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.34□□□□□ -0.27
Ccr6O54689 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccr6O54689 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccr6O54689 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.33□□□□□ -0.27
Ccr6O54689 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccr6O54689 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccr6O54689 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccr6O54689 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccr6O54689 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccr6O54689 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccr6O54689 Gm27405-201ENSMUST00000184201 112 ntBASIC13.33□□□□□ -0.28
Ccr6O54689 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccr6O54689 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccr6O54689 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Ccr6O54689 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccr6O54689 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccr6O54689 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr6O54689 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Ccr6O54689 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.32□□□□□ -0.28
Ccr6O54689 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr6O54689 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccr6O54689 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccr6O54689 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccr6O54689 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr6O54689 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr6O54689 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr6O54689 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr6O54689 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr6O54689 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr6O54689 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr6O54689 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr6O54689 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.32□□□□□ -0.28
Ccr6O54689 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccr6O54689 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms