Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Efnb3O35393 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Efnb3O35393 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Efnb3O35393 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.56□□□□□ -0.4
Efnb3O35393 Gm37055-201ENSMUST00000191866 133 ntBASIC12.56□□□□□ -0.4
Efnb3O35393 Gm3375-201ENSMUST00000203929 796 ntBASIC12.56□□□□□ -0.4
Efnb3O35393 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.56□□□□□ -0.4
Efnb3O35393 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Efnb3O35393 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Efnb3O35393 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.55□□□□□ -0.4
Efnb3O35393 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Efnb3O35393 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.55□□□□□ -0.4
Efnb3O35393 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Efnb3O35393 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.55□□□□□ -0.4
Efnb3O35393 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Efnb3O35393 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.55□□□□□ -0.4
Efnb3O35393 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Efnb3O35393 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.55□□□□□ -0.4
Efnb3O35393 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Efnb3O35393 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Efnb3O35393 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Efnb3O35393 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Efnb3O35393 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Efnb3O35393 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.54□□□□□ -0.4
Efnb3O35393 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.54□□□□□ -0.4
Efnb3O35393 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Efnb3O35393 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.54□□□□□ -0.4
Efnb3O35393 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.54□□□□□ -0.4
Efnb3O35393 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.54□□□□□ -0.4
Efnb3O35393 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.54□□□□□ -0.4
Efnb3O35393 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Efnb3O35393 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Efnb3O35393 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms