Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Capn1O35350 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Capn1O35350 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Capn1O35350 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Capn1O35350 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.68□□□□□ -0.06
Capn1O35350 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Capn1O35350 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.68□□□□□ -0.06
Capn1O35350 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.68□□□□□ -0.06
Capn1O35350 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.68□□□□□ -0.06
Capn1O35350 AW822252-206ENSMUST00000208904 237 ntBASIC14.68□□□□□ -0.06
Capn1O35350 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.68□□□□□ -0.06
Capn1O35350 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Rps4l-201ENSMUST00000071745 943 ntBASIC14.68□□□□□ -0.06
Capn1O35350 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.68□□□□□ -0.06
Capn1O35350 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Capn1O35350 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.67□□□□□ -0.06
Capn1O35350 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Capn1O35350 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.67□□□□□ -0.06
Capn1O35350 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Gm18195-201ENSMUST00000207604 706 ntBASIC14.67□□□□□ -0.06
Capn1O35350 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.67□□□□□ -0.06
Capn1O35350 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Capn1O35350 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Capn1O35350 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Capn1O35350 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Capn1O35350 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Capn1O35350 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.66□□□□□ -0.06
Capn1O35350 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Capn1O35350 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.66□□□□□ -0.06
Capn1O35350 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
Capn1O35350 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.66□□□□□ -0.06
Capn1O35350 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.66□□□□□ -0.06
Capn1O35350 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Capn1O35350 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Capn1O35350 Gm6296-201ENSMUST00000222599 943 ntBASIC14.66□□□□□ -0.06
Capn1O35350 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Capn1O35350 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Capn1O35350 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Capn1O35350 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Capn1O35350 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.65□□□□□ -0.06
Capn1O35350 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Capn1O35350 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Capn1O35350 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Capn1O35350 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Capn1O35350 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.65□□□□□ -0.06
Capn1O35350 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.65□□□□□ -0.06
Capn1O35350 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Capn1O35350 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.65□□□□□ -0.06
Capn1O35350 Gm18733-201ENSMUST00000173950 856 ntBASIC14.65□□□□□ -0.06
Capn1O35350 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Capn1O35350 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms