Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ebf3O08791 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ebf3O08791 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.44■□□□□ 0.22
Ebf3O08791 Gm6550-201ENSMUST00000187574 993 ntBASIC16.44■□□□□ 0.22
Ebf3O08791 Gm6089-201ENSMUST00000197666 938 ntBASIC16.44■□□□□ 0.22
Ebf3O08791 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.44■□□□□ 0.22
Ebf3O08791 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ebf3O08791 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.43■□□□□ 0.22
Ebf3O08791 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Ebf3O08791 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Gm15467-201ENSMUST00000120582 445 ntBASIC16.43■□□□□ 0.22
Ebf3O08791 Gm12260-201ENSMUST00000122447 411 ntBASIC16.43■□□□□ 0.22
Ebf3O08791 Gm11780-201ENSMUST00000136880 516 ntBASIC16.43■□□□□ 0.22
Ebf3O08791 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.43■□□□□ 0.22
Ebf3O08791 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ebf3O08791 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.43■□□□□ 0.22
Ebf3O08791 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ebf3O08791 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ebf3O08791 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.42■□□□□ 0.22
Ebf3O08791 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ebf3O08791 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ebf3O08791 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Ebf3O08791 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.42■□□□□ 0.22
Ebf3O08791 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.42■□□□□ 0.22
Ebf3O08791 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.42■□□□□ 0.22
Ebf3O08791 Gm36967-201ENSMUST00000193814 266 ntBASIC16.42■□□□□ 0.22
Ebf3O08791 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.42■□□□□ 0.22
Ebf3O08791 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.42■□□□□ 0.22
Ebf3O08791 Gm8655-201ENSMUST00000221159 852 ntBASIC16.42■□□□□ 0.22
Ebf3O08791 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.42■□□□□ 0.22
Ebf3O08791 AV026068-213ENSMUST00000223675 1171 ntBASIC16.42■□□□□ 0.22
Ebf3O08791 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.42■□□□□ 0.22
Ebf3O08791 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.42■□□□□ 0.22
Ebf3O08791 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ebf3O08791 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ebf3O08791 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Ebf3O08791 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf3O08791 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf3O08791 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.41■□□□□ 0.22
Ebf3O08791 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf3O08791 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.41■□□□□ 0.22
Ebf3O08791 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf3O08791 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf3O08791 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms