Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Gm25406-201ENSMUST00000157599 105 ntBASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Gm6257-201ENSMUST00000163864 910 ntBASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Trav13d-3J3QMG8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-3J3QMG8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms