Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Syce3B5KM66 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Syce3B5KM66 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Syce3B5KM66 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.2■□□□□ 0.5
Syce3B5KM66 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.2■□□□□ 0.5
Syce3B5KM66 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Syce3B5KM66 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Syce3B5KM66 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Syce3B5KM66 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syce3B5KM66 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Syce3B5KM66 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syce3B5KM66 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syce3B5KM66 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.19■□□□□ 0.5
Syce3B5KM66 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syce3B5KM66 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Syce3B5KM66 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Syce3B5KM66 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syce3B5KM66 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syce3B5KM66 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Syce3B5KM66 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syce3B5KM66 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syce3B5KM66 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Syce3B5KM66 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syce3B5KM66 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syce3B5KM66 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syce3B5KM66 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC18.18■□□□□ 0.5
Syce3B5KM66 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Syce3B5KM66 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.18■□□□□ 0.5
Syce3B5KM66 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Syce3B5KM66 Gm12527-201ENSMUST00000117967 564 ntBASIC18.18■□□□□ 0.5
Syce3B5KM66 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.18■□□□□ 0.5
Syce3B5KM66 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.18■□□□□ 0.5
Syce3B5KM66 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.18■□□□□ 0.5
Syce3B5KM66 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.18■□□□□ 0.5
Syce3B5KM66 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.18■□□□□ 0.5
Syce3B5KM66 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Syce3B5KM66 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syce3B5KM66 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Syce3B5KM66 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Syce3B5KM66 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.17■□□□□ 0.5
Syce3B5KM66 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.17■□□□□ 0.5
Syce3B5KM66 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Syce3B5KM66 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Syce3B5KM66 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Syce3B5KM66 Gm12441-201ENSMUST00000121806 588 ntBASIC18.17■□□□□ 0.5
Syce3B5KM66 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Syce3B5KM66 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Syce3B5KM66 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Syce3B5KM66 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.17■□□□□ 0.5
Syce3B5KM66 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.17■□□□□ 0.5
Syce3B5KM66 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Syce3B5KM66 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syce3B5KM66 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Syce3B5KM66 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syce3B5KM66 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syce3B5KM66 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms