Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Gm11620-201ENSMUST00000118770 1845 ntBASIC8.29□□□□□ -1.08
Ubr4A2AN08 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Ubr4A2AN08 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC8.29□□□□□ -1.08
Ubr4A2AN08 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm13410-201ENSMUST00000117058 1415 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC8.28□□□□□ -1.08
Ubr4A2AN08 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 AC155637.1-201ENSMUST00000218560 636 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Tfap2a-209ENSMUST00000225180 1828 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm4609-201ENSMUST00000106443 1002 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm5138-201ENSMUST00000113842 1002 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm15191-201ENSMUST00000117933 1000 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm12182-201ENSMUST00000118655 1008 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm13882-201ENSMUST00000120886 1002 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm10284-201ENSMUST00000145057 1005 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm10481-201ENSMUST00000179228 1002 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm2574-201ENSMUST00000181051 1002 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm3200-201ENSMUST00000181493 1002 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm4518-201ENSMUST00000182638 718 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm8330-201ENSMUST00000182754 1008 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm4575-201ENSMUST00000182991 1002 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm8709-201ENSMUST00000183230 1012 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm18893-201ENSMUST00000198416 943 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm10293-201ENSMUST00000076317 1002 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm43947-201ENSMUST00000203019 959 ntBASIC8.28□□□□□ -1.08
Ubr4A2AN08 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
Ubr4A2AN08 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Ubr4A2AN08 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ubr4A2AN08 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Ubr4A2AN08 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Gm5184-201ENSMUST00000220417 1702 ntBASIC8.27□□□□□ -1.09
Ubr4A2AN08 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC8.27□□□□□ -1.09
Ubr4A2AN08 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Mir6979-201ENSMUST00000183927 56 ntBASIC8.27□□□□□ -1.09
Ubr4A2AN08 Gm44799-201ENSMUST00000207639 1202 ntBASIC8.27□□□□□ -1.09
Ubr4A2AN08 Gm7067-201ENSMUST00000207698 1249 ntBASIC8.27□□□□□ -1.09
Ubr4A2AN08 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Gm18246-201ENSMUST00000221023 728 ntBASIC8.27□□□□□ -1.09
Ubr4A2AN08 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms