Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms