Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav19A0A0B4J1K4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Gm20760-201ENSMUST00000179197 648 ntBASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav19A0A0B4J1K4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms