Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm36967-201ENSMUST00000193814 266 ntBASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm10710-201ENSMUST00000047876 3971 ntBASIC10.84□□□□□ -0.67
Trav4-3A0A0B4J1K1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Gm12134-201ENSMUST00000122109 520 ntBASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Gm42555-201ENSMUST00000199304 1039 ntBASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav4-3A0A0B4J1K1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Il3ra-202ENSMUST00000223589 738 ntBASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC10.82□□□□□ -0.68
Trav4-3A0A0B4J1K1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms