Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.83□□□□□ -0.35
Trav6d-5A0A075B6B9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6d-5A0A075B6B9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.83□□□□□ -0.35
Trav6d-5A0A075B6B9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-5A0A075B6B9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-5A0A075B6B9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm12441-201ENSMUST00000121806 588 ntBASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Odf3b-204ENSMUST00000227834 930 ntBASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-5A0A075B6B9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms