Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9d-1A0A075B699 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9d-1A0A075B699 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9d-1A0A075B699 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9d-1A0A075B699 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Trav9d-1A0A075B699 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9d-1A0A075B699 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Trav9d-1A0A075B699 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9d-1A0A075B699 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9d-1A0A075B699 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-1A0A075B699 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Gm27389-201ENSMUST00000183622 195 ntBASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-1A0A075B699 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Gm37722-201ENSMUST00000193757 208 ntBASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms