Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-2A0A075B638 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-2A0A075B638 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Gm15378-201ENSMUST00000121894 207 ntBASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-2A0A075B638 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms