Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Gm14057-201ENSMUST00000120631 482 ntBASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8n-2A0A075B633 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Gm27494-201ENSMUST00000184735 189 ntBASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8n-2A0A075B633 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8n-2A0A075B633 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8n-2A0A075B633 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8n-2A0A075B633 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8n-2A0A075B633 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8n-2A0A075B633 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trav8n-2A0A075B633 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8n-2A0A075B633 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.45□□□□□ -0.1
Trav8n-2A0A075B633 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms