Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.21■□□□□ 0.19
Gm5538W4VSP6 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.21■□□□□ 0.19
Gm5538W4VSP6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.21■□□□□ 0.19
Gm5538W4VSP6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm5538W4VSP6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm5538W4VSP6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Gm5538W4VSP6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm5538W4VSP6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm5538W4VSP6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Gm18669-201ENSMUST00000216049 778 ntBASIC16.2■□□□□ 0.18
Gm5538W4VSP6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gm5538W4VSP6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Gm25745-201ENSMUST00000174945 133 ntBASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5538W4VSP6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Gm7506-201ENSMUST00000207758 815 ntBASIC16.18■□□□□ 0.18
Gm5538W4VSP6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5538W4VSP6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5538W4VSP6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms