Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm14140-201ENSMUST00000119999 995 ntBASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Mir6404-201ENSMUST00000183699 94 ntBASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.22■□□□□ 0.35
Nr1h3Q9Z0Y9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nr1h3Q9Z0Y9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Nr1h3Q9Z0Y9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm6736-201ENSMUST00000166583 948 ntBASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm27628-201ENSMUST00000184911 107 ntBASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.2■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm2756-201ENSMUST00000195851 400 ntBASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms