Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 AA414768-201ENSMUST00000121924 1257 ntBASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Mir6404-201ENSMUST00000183699 94 ntBASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.23■□□□□ 0.03
Vps29Q9QZ88 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps29Q9QZ88 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 App-207ENSMUST00000227737 2827 ntBASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Gm13836-201ENSMUST00000121159 501 ntBASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps29Q9QZ88 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps29Q9QZ88 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
Vps29Q9QZ88 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps29Q9QZ88 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps29Q9QZ88 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps29Q9QZ88 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps29Q9QZ88 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps29Q9QZ88 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps29Q9QZ88 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps29Q9QZ88 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.2■□□□□ 0.02
Vps29Q9QZ88 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps29Q9QZ88 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps29Q9QZ88 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps29Q9QZ88 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps29Q9QZ88 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.2■□□□□ 0.02
Vps29Q9QZ88 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps29Q9QZ88 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps29Q9QZ88 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps29Q9QZ88 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps29Q9QZ88 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms