Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Gm44450-201ENSMUST00000199528 114 ntBASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn5Q9JL35 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 BC037039-201ENSMUST00000192003 2205 ntBASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.9■□□□□ 0.46
Hmgn5Q9JL35 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hmgn5Q9JL35 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn5Q9JL35 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Hmgn5Q9JL35 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms