Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Smco4Q9JIS3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smco4Q9JIS3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smco4Q9JIS3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Smco4Q9JIS3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.83□□□□□ -0.36
Smco4Q9JIS3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco4Q9JIS3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Mir7075-201ENSMUST00000184187 82 ntBASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smco4Q9JIS3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco4Q9JIS3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco4Q9JIS3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco4Q9JIS3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco4Q9JIS3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco4Q9JIS3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco4Q9JIS3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco4Q9JIS3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco4Q9JIS3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco4Q9JIS3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco4Q9JIS3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smco4Q9JIS3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms