Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Ube4bQ9ES00 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ube4bQ9ES00 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ube4bQ9ES00 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Ube4bQ9ES00 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ube4bQ9ES00 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Gm18666-201ENSMUST00000190039 958 ntBASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4bQ9ES00 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4bQ9ES00 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Gm6576-201ENSMUST00000169678 883 ntBASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Phf7-203ENSMUST00000226565 1971 ntBASIC15.31■□□□□ 0.04
Ube4bQ9ES00 BC037039-201ENSMUST00000192003 2205 ntBASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4bQ9ES00 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4bQ9ES00 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms