Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps35Q9EQH3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps35Q9EQH3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps35Q9EQH3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps35Q9EQH3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Vps35Q9EQH3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.93■□□□□ 0.14
Vps35Q9EQH3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Vps35Q9EQH3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps35Q9EQH3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps35Q9EQH3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps35Q9EQH3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps35Q9EQH3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps35Q9EQH3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps35Q9EQH3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps35Q9EQH3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Gm15372-201ENSMUST00000120729 834 ntBASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Gm28033-201ENSMUST00000184224 96 ntBASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.91■□□□□ 0.14
Vps35Q9EQH3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps35Q9EQH3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Vps35Q9EQH3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms